Seminar

CANSSI National Seminar Series: April speaker, Grace Yi

Talk Title: Learning Noisy Data

Time

Seminar: 10:00am–11:30am PST
Student Session: 12:00pm–1:00pm PST

Registration & talk details

This talk has been organized by the Canadian Statistical Sciences Institute (CANSSI).

Learn about and register for this talk and the student session on the Canadian Statistical Sciences Institute (CANSSI) website. (Once registration opens, you'll see a green Seminar Registration button at the top of the CANSSI page.)

The CANSSI National Seminar Series

Grace Yi is the final speaker and Distinguished Lecturer of the winter/spring season of the CANSSI National Seminar Series.

All speakers in the series will provide suggested read-ahead journal articles, as part of a journal club. A few weeks before Grace’s seminar, check the CANSSI seminar page for Grace's seminar to see her suggested article.

CANSSI National Seminar Series: March speaker, Fabrizia Mealli

Talk Title: Bipartite Interference and Air Pollution Transport: Estimating Health Effects of Power Plant Interventions

Time

Seminar: 10:00am–11:30am PST
Student Session: 12:00pm–1:00pm PST

Registration & talk details

This talk has been organized by the Canadian Statistical Sciences Institute (CANSSI).

Learn about and register for this talk and the student session on the Canadian Statistical Sciences Institute (CANSSI) website.

The CANSSI National Seminar Series

Fabrizia Mealli is the third speaker of the winter/spring season of the CANSSI National Seminar Series. This winter/spring, the theme of the series is causal inference.

All speakers in the series will provide suggested read-ahead journal articles, as part of a journal club. Before this talk, have a look at Fabrizia’s suggested article.

CANSSI National Seminar Series: February speaker, Dylan Small

Talk Title: Testing an Elaborate Theory of a Causal Hypothesis

Time

Seminar: 10:00am–11:30am PST
Student Session: 12:00pm–1:00pm PST

Registration & talk details

This talk has been organized by the Canadian Statistical Sciences Institute (CANSSI).

Learn about and register for this talk and the student session on the Canadian Statistical Sciences Institute (CANSSI) website.

The CANSSI National Seminar Series

Dylan Small is the second speaker of the winter/spring season of the CANSSI National Seminar Series. This winter/spring, the theme of the series is causal inference.

All speakers in the series will provide suggested read-ahead journal articles, as part of a journal club. Before this talk, have a look at Dylan’s suggested article.

CANSSI National Seminar Series—January speaker, Linbo Wang

Talk Title: The Promises of Multiple Outcomes

Time

Seminar: 10:00am–11:30am PST
Student Session: 12:00pm–1:00pm PST

Registration & talk details

This talk has been organized by the Canadian Statistical Sciences Institute (CANSSI), as part of their National Seminar Series.

Learn about and register for this talk and the student session on the Canadian Statistical Sciences Institute (CANSSI) website.

The CANSSI National Seminar Series

Linbo Wang is the first speaker of the winter/spring season of the CANSSI National Seminar Series. This winter/spring, the theme of the series is causal inference.

All speakers in the series will provide suggested read-ahead journal articles, as part of a journal club. Details on Linbo’s read-ahead article and other suggested reading can be found here.

Addressing Open Challenges in Data Science Education

*To join this seminar, attendees will need to request Zoom connection details from headsec@stat.ubc.ca.

Post-seminar Q&A: Graduate students are invited to stay after the seminar for a Q&A session with the speaker (~12pm–12:30pm).

Abstract: In this talk, I will give an overview of the Johns Hopkins Data Science Lab: who we are, what are our goals, and the types of projects we are working on to make data science accessible world-wide. Then, I will discuss projects that I have focused on related to data science education, including developing the Open Case Studies educational resource that educators can use in the classroom to teach students how to effectively derive knowledge from data derived from real-world challenges.

The CHIME Telescope and the Search for Fast Radio Bursts

*To join this seminar, attendees will need to request Zoom connection details from headsec@stat.ubc.ca.

Post-seminar Q&A: Graduate students are invited to stay after the seminar for a Q&A session with the speaker (~12pm–12:30pm).

Abstract: The Canadian Hydrogen Intensity Mapping Experiment (CHIME) is a radio-telescope array located at the Dominion Radio Astrophysical Observatory (DRAO) near Penticton, BC. CHIME’s novel, digitally-driven design, combined with a massive processing capacity built from consumer computer hardware, make it a versatile instrument that can be used in a variety of astrophysical experiments.

In this talk, I will give an overview of CHIME, with a focus on the CHIME/FRB experiment. Fast Radio Bursts (FRBs) are millisecond-duration flashes of radio-frequency signal with unknown extra-galactic origins. CHIME/FRB’s realtime processing pipeline enabled us to expand the sample of known FRBs by order of magnitude within a couple of years of its construction, gathering important insights into their characteristics and likely origins.

Bayesian sparse regression for large-scale observational healthcare analytics

*To join this seminar via Zoom, attendees will need to request connection details from headsec@stat.ubc.ca.

Post-seminar Q&A: Graduate students are invited to stay after the seminar for a Q&A with the speaker (~12pm–12:30pm).

Abstract: Growing availability of large healthcare databases presents opportunities to investigate how patients' response to treatments vary across subgroups. Even with a large cohort size found in these databases, however, low incidence rates make it difficult to identify causes of treatment effect heterogeneity among a large number of clinical covariates. Sparse regression provides a potential solution. The Bayesian approach is particularly attractive in our setting, where the signals are weak and heterogeneity across databases are substantial. Applications of Bayesian sparse regression to large-scale data sets, however, have been hampered by the lack of scalable computational techniques. We adapt ideas from numerical linear algebra and computational physics to tackle the critical bottleneck in computing posteriors under Bayesian sparse regression. For linear and logistic models, we develop the conjugate gradient sampler for high-dimensional Gaussians along with the theory of prior-preconditioning. For more general regression and survival models, we develop the curvature-adaptive Hamiltonian Monte Carlo to efficiently sample from high-dimensional log-concave distributions. We demonstrate the scalability of our method on an observational study involving n = 1,065,745 patients and p = 15,779 clinical covariates, designed to compare effectiveness of the most common first-line hypertension treatments. The large cohort size allows us to detect an evidence of treatment effect heterogeneity previously unreported by clinical trials.

Accounting for Preferential Sampling in the Statistical Analysis of Spatio-temporal Data

*To join this seminar via Zoom, attendees will need to request connection details from headsec@stat.ubc.ca.

Abstract: Spatio-temporal statistical methods are widely used to model natural phenomena across both space and time. Example phenomena include the concentrations of airborne pollutants and the distributions of endangered species. A spatio-temporal process is said to have been preferentially sampled when the locations and/or times chosen to observe it depend stochastically on the values of the process at the chosen locations and/or times. When standard statistical methodologies are used, predictions of a preferentially sampled spatio-temporal process into unsampled regions and times may be severely biased.

In this talk, we begin by providing a visual demonstration of preferential sampling in continuous-space, discrete-space, and point-pattern data. Next, we argue that preferential sampling is highly prevalent in real-world data, and in some cases, national laws may even dictate that data be preferentially sampled. Following this, we introduce two case studies: estimating historical UK black smoke pollution levels using data collected from a preferentially sampled air quality network and estimating the space-use of an endangered ecotype of killer whales using sightings data collected from the commercial whale-watching industry. For the first dataset, to confirm the presence of preferential sampling, we develop a fast, intuitive, powerful, and general test for preferential sampling. Then, to estimate bias-corrected air pollution levels across the UK, we develop the first general framework for modelling preferentially sampled spatio-temporal data. We demonstrate that existing estimates of population-level black smoke exposures may be highly inaccurate due to preferential sampling. Finally, for modelling the killer whale space-use, we develop a point process framework for modelling preferentially sampled spatio-temporal point-pattern data. We successfully develop maps that identify core areas of high activity that will hopefully prove useful for conservation purposes.

Statisticians from almost every domain routinely scrutinise the data collection protocols before analysing data. Yet within the domain of spatio-temporal modelling, few questions are typically asked about how and why the sampled locations and times were chosen. This needs to change. Ultimately, we hope that investigations into preferential sampling will become an essential component within spatio-temporal analyses, akin to model diagnostics. The methods presented in this talk are widely applicable, allowing researchers to routinely perform such investigations.

CANSSI National Seminar Series: October speaker, Christopher Jackson

Talk Title: A Comparison of Two Frameworks for Multi-State Modelling, Applied to Outcomes after Hospital Admissions with COVID-19

Time

Seminar: 10:00–11:30am PST
Student Session: 12:00pm–1:00pm PST

Registration & talk details

Learn about and register for this talk and the student session on CANSSI’s website.

CANSSI National Seminar Series

Christopher Jackson is the second speaker in the Canadian Statistical Sciences Institute (CANSSI) National Seminar Series. This fall, the theme of the series is hidden Markov models.

All speakers in the series will provide suggested read-ahead journal articles, as part of a journal club. Christopher’s seminar will include these two journal club papers.

How to Improve Prediction Accuracy in the Analysis of Computer Experiments: Exploitation of Low-Order Effects and Dimensional Analysis

*To join this seminar via Zoom, attendees will need to request connection details from headsec@stat.ubc.ca.

Abstract: Computer codes simulate natural phenomena and engineering processes where physical experimentation is too costly or infeasible. Hence a computer experiment obtains data by running such a code. Nonetheless, the code can be too resource-consuming to run numerous times. Thus we replace a code with a Gaussian Stochastic Process (GaSP) statistical model, as a computationally faster surrogate.  

The talk will outline two strategies to improve prediction accuracy of these surrogates: novel correlation structures for GaSPs based on principles for physical factorial designs, and Dimensional Analysis. It will then focus on Dimensional Analysis, which pays attention to fundamental physical dimensions when modelling scientific and engineering systems. It goes back at least a century but has recently caught statisticians' attention, in the design of physical and computer experiments. The core idea is to analyze dimensionless quantities derived from the original variables and possibly design for them.

Dimensional Analysis has significant challenges in variable selection, which we address with Functional Analysis of Variance. We apply this strategy in various case studies to improve prediction accuracy. Thus we propose new modelling frameworks in computer experiments to accomplish more accurate surrogate models.